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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1591
candidate regulatory elements
1159
target gene predictions
951
histone modifications
786
binding sites
581
accessible chromatin
108
variant allelic effects
33
chromatin state
9
caQTL
7
eQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
1
pQTL
1
sQTL
Date released
2323
February, 2021
1598
September, 2022
278
February, 2024
272
May, 2021
268
June, 2020
126
May, 2020
87
October, 2022
57
January, 2020
50
August, 2021
42
March, 2020
34
November, 2022
29
February, 2023
27
August, 2017
13
November, 2019
12
May, 2022
8
October, 2019
5
January, 2022
3
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
September, 2018
Available data
5236
bed bed3+
828
bed bed9
569
tsv
258
bigWig
101
txt
38
bigBed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5191
Homo sapiens
Biosample type
2097
cell line
1801
tissue
1031
primary cell
303
in vitro differentiated cells
3
stem cell
Organ
393
epithelium
309
brain
306
kidney
connective tissue
270
musculature of body
227
lung
209
intestine
190
bodily fluid
181
blood
176
embryo
175
limb
163
heart
155
skin of body
154
vasculature
131
large intestine
121
pancreas
118
blood vessel
109
extraembryonic component
96
liver
94
eye
84
stomach
74
uterus
67
bone element
67
mammary gland
63
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
51
ureter
49
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
mouth
11
bronchus
11
pituitary gland
10
lymphatic vessel
9
breast
8
bone marrow
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5236
AMP
283
ENCODE
58
T1D
16
LungMap
Genome assembly (visualization)
5231
hg19
447
GRCh38
1
hg18
organ_slims!
connective tissue
BIOSAMPLE
TYPE
5236 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
variant to gene
pQTL
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 748 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
1
muscle of arm
33
16
1
1
+ See 208 more…
primary cell
monocyte
1
86
1
17
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
+ See 222 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
1
1
5
neuroblastoma cell line
6
2
+ See 92 more…
stem cell
H1-hESC
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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