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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1389
candidate regulatory elements
1156
target gene predictions
902
histone modifications
770
binding sites
759
accessible chromatin
94
variant allelic effects
27
chromatin state
11
caQTL
7
eQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
1
pQTL
1
sQTL
Date released
2160
February, 2021
1388
September, 2022
283
November, 2021
279
February, 2024
259
May, 2021
243
June, 2020
109
May, 2020
84
October, 2022
54
January, 2021
50
August, 2021
40
March, 2020
37
January, 2020
34
November, 2022
30
February, 2023
21
August, 2017
16
April, 2020
12
May, 2022
11
November, 2019
8
October, 2019
4
January, 2022
1
April, 2019
1
August, 2020
1
August, 2022
1
September, 2018
Available data
5126
bed bed3+
751
tsv
713
bed bed9
460
bigWig
101
txt
34
bed bed9+
28
bigBed bed9
24
csv
15
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5080
Homo sapiens
Biosample type
2032
cell line
1425
tissue
1365
primary cell
300
in vitro differentiated cells
2
stem cell
Organ
547
epithelium
connective tissue
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
4769
AMP
283
ENCODE
58
T1D
16
LungMap
Genome assembly (visualization)
5119
hg19
702
GRCh38
1
hg18
organ_slims!
connective tissue
brain
limb
BIOSAMPLE
TYPE
5126 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
variant to gene
pQTL
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 735 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
kidney
29
14
2
1
10
1
1
lung
33
17
small intestine
29
17
1
+ See 131 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
2
15
2
2
1
+ See 286 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
1
1
5
neuroblastoma cell line
6
2
+ See 89 more…
stem cell
H1-hESC
1
mesendoderm
1
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