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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1590
candidate regulatory elements
1278
target gene predictions
952
histone modifications
895
chromatin state
824
accessible chromatin
786
binding sites
634
gene expression
153
differential activity
150
eQTL
124
variant allelic effects
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
268
June, 2020
190
November, 2021
99
January, 2022
56
January, 2020
54
May, 2020
49
August, 2021
49
February, 2024
37
November, 2022
29
May, 2021
27
January, 2021
25
February, 2023
24
February, 2020
16
April, 2020
12
February, 2021
12
November, 2019
11
May, 2022
8
October, 2019
6
September, 2022
1
March, 2023
1
September, 2018
Available data
821
bed bed3+
473
bigWig
23
tsv
8
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
928
Homo sapiens
Biosample type
462
primary cell
289
tissue
167
cell line
56
in vitro differentiated cells
Organ
215
epithelium
connective tissue
80
pancreas
71
brain
60
eye
54
kidney
42
vasculature
34
musculature of body
32
blood vessel
32
heart
32
liver
25
limb
24
intestine
20
adipose tissue
16
artery
16
lung
16
skin of body
15
bone element
14
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
739
AMP
190
ENCODE
28
T1D
16
LungMap
1
ITG
Genome assembly (visualization)
868
hg19
462
GRCh38
1
hg18
organ_slims!
connective tissue
nose
BIOSAMPLE
TYPE
974 results
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Clear Filters
accessible chromatin
eQTL
primary cell
monocyte
18
4
macrophage
12
7
endothelial cell
15
1
excitatory neuron
12
smooth muscle cell
9
1
+ See 201 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
13
kidney
10
1
liver
4
7
+ See 122 more…
cell line
EndoC_BH1
8
lymphoblastoid cell line
1
6
HepG2
2
Rh-4 cell
2
iPSC derived cell line
2
+ See 145 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
4
B cell
2
+ See 25 more…
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