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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1536
candidate regulatory elements
1246
target gene predictions
948
histone modifications
chromatin state
818
accessible chromatin
785
binding sites
634
gene expression
153
differential activity
149
eQTL
124
variant allelic effects
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2451
February, 2021
1538
September, 2022
365
May, 2021
355
February, 2024
280
November, 2021
269
September, 2023
265
June, 2020
142
May, 2020
119
March, 2020
117
August, 2021
99
January, 2022
89
October, 2022
73
January, 2020
63
March, 2023
55
February, 2020
54
January, 2021
37
November, 2022
31
February, 2023
30
March, 2024
16
April, 2020
13
November, 2019
12
May, 2022
8
August, 2018
8
October, 2019
1
August, 2020
1
August, 2022
1
January, 2018
1
July, 2020
1
September, 2018
Available data
5460
bed bed3+
835
tsv
486
bigWig
101
txt
24
csv
15
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6446
Homo sapiens
Biosample type
2131
cell line
1998
primary cell
1981
tissue
380
in vitro differentiated cells
2
stem cell
Organ
896
epithelium
575
kidney
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
pericardium
Project
5864
AMP
280
ENCODE
266
KPMP
58
T1D
16
LungMap
9
community
1
ITG
Genome assembly (visualization)
5581
hg19
917
GRCh38
2
hg18
organ_slims!
connective tissue
pericardium
extraembryonic component
annotation_type!
chromatin state
BIOSAMPLE
TYPE
6494 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
EndoC_BH1
1
1
8
1
8
3
1
+ See 751 more…
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 390 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
+ See 243 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
extended pluripotent stem (EPS) cells
9
+ See 108 more…
stem cell
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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