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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
189
candidate regulatory elements
152
target gene predictions
119
chromatin state
105
accessible chromatin
63
gene expression
58
histone modifications
45
eQTL
41
Fine-mapped variants
27
differential activity
25
variant allelic effects
21
binding sites
2
sQTL
2
variant to gene
Date released
314
September, 2022
170
February, 2021
47
March, 2020
45
May, 2021
40
March, 2023
29
January, 2020
28
June, 2020
24
February, 2024
23
January, 2022
22
May, 2020
21
November, 2021
20
February, 2020
18
January, 2021
9
August, 2017
8
August, 2021
6
August, 2018
6
October, 2019
5
October, 2022
4
May, 2019
3
November, 2019
3
September, 2023
1
April, 2019
1
February, 2023
1
January, 2018
1
March, 2024
Available data
553
bed bed3+
134
tsv
109
bed bed9
73
bigWig
13
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
848
Homo sapiens
Biosample type
559
tissue
164
primary cell
113
cell line
12
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
808
AMP
21
ENCODE
18
T1D
2
community
Genome assembly (visualization)
724
hg19
241
GRCh38
organ_slims!
connective tissue
BIOSAMPLE
TYPE
849 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
Fine-mapped variants
differential activity
variant allelic effects
binding sites
sQTL
variant to gene
tissue
brain
29
16
18
2
1
3
2
1
1
placenta
26
15
14
1
2
1
1
islet of Langerhans
1
3
6
11
1
13
2
1
2
2
2
body of pancreas
8
5
4
2
1
3
1
caudate nucleus
5
3
4
2
1
1
2
3
1
+ See 72 more…
primary cell
pancreatic ductal cell
3
6
3
2
3
1
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
7
5
4
1
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 20 more…
cell line
EndoC_BH1
1
8
8
3
1
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 15 more…
in vitro differentiated cells
trophoblast cell
2
2
1
pancreatic ductal cell
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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