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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
candidate regulatory elements
79
target gene predictions
71
accessible chromatin
51
chromatin state
46
gene expression
27
differential activity
18
eQTL
13
variant allelic effects
10
histone modifications
8
Fine-mapped variants
6
binding sites
2
sQTL
2
variant to gene
Date released
143
September, 2022
64
February, 2021
40
March, 2023
34
May, 2021
23
February, 2024
21
November, 2021
18
January, 2021
12
March, 2020
9
June, 2020
9
May, 2020
8
August, 2021
6
August, 2018
6
January, 2022
6
October, 2019
5
February, 2020
5
January, 2020
3
August, 2017
3
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
Available data
268
bed bed3+
73
tsv
58
bigWig
47
bed bed9
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
csv
3
xls
Organism
418
Homo sapiens
Biosample type
235
tissue
138
primary cell
37
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
377
AMP
21
ENCODE
18
T1D
2
community
Genome assembly (visualization)
333
hg19
104
GRCh38
organ_slims!
connective tissue
BIOSAMPLE
TYPE
418 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
placenta
26
15
1
14
1
2
1
islet of Langerhans
1
6
3
11
13
1
1
2
2
2
2
tibial nerve
6
3
3
4
2
2
2
3
body of pancreas
8
5
4
2
1
1
3
pancreas
5
5
5
3
1
1
1
1
+ See 12 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
7
5
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 14 more…
cell line
EndoC_BH1
1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 2 more…
in vitro differentiated cells
trophoblast cell
2
2
1
pancreatic ductal cell
3
See all biosamples
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