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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
22
candidate regulatory elements
21
accessible chromatin
20
target gene predictions
16
chromatin state
12
binding sites
12
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
43
September, 2022
19
February, 2021
17
February, 2024
10
August, 2021
6
March, 2020
4
June, 2020
4
November, 2021
3
August, 2017
3
March, 2023
3
May, 2021
2
May, 2020
2
May, 2022
1
February, 2020
1
January, 2020
1
January, 2022
1
November, 2019
1
October, 2022
1
September, 2018
Available data
93
bed bed3+
13
bed bed9
12
bigWig
8
tsv
1
bam
1
bigBed bed9
Organism
122
Homo sapiens
Biosample type
56
tissue
36
primary cell
26
cell line
4
in vitro differentiated cells
Organ
696
epithelium
450
kidney
447
brain
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
118
AMP
4
ENCODE
Genome assembly (visualization)
115
hg19
48
GRCh38
2
hg18
organ_slims!
connective tissue
annotation_type!
gene expression
BIOSAMPLE
TYPE
122 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
13
4
10
9
1
2
7
1
1
right lobe of liver
2
1
1
1
3
primary cell
hepatocyte
1
8
3
1
1
4
2
endothelial cell of hepatic sinusoid
6
6
pancreatic endothelial cell
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
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