Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
gene expression
22
candidate regulatory elements
21
accessible chromatin
20
target gene predictions
16
chromatin state
12
binding sites
12
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
variant allelic effects
1
caQTL
Date released
43
September, 2022
28
February, 2024
22
February, 2021
10
August, 2021
10
March, 2020
4
June, 2020
4
March, 2023
4
November, 2021
3
August, 2017
3
May, 2021
2
February, 2020
2
January, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
90
bed bed3+
27
tsv
21
bigWig
13
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
142
Homo sapiens
Biosample type
58
tissue
51
primary cell
26
cell line
7
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
138
AMP
4
ENCODE
Genome assembly (visualization)
112
hg19
57
GRCh38
2
hg18
organ_slims!
connective tissue
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
142 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
caQTL
tissue
liver
1
13
4
10
9
1
2
7
1
1
right lobe of liver
1
2
1
1
1
3
primary cell
hepatocyte
13
1
8
3
1
1
4
endothelial cell of hepatic sinusoid
4
6
6
pancreatic endothelial cell
1
3
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
Download