Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
22
candidate regulatory elements
22
gene expression
21
accessible chromatin
20
target gene predictions
16
chromatin state
12
binding sites
12
histone modifications
7
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
43
September, 2022
29
February, 2024
22
February, 2021
10
August, 2021
10
March, 2020
4
June, 2020
4
March, 2023
4
November, 2021
3
August, 2017
3
May, 2021
February, 2020
2
January, 2020
2
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
93
bed bed3+
25
tsv
21
bigWig
13
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
143
Homo sapiens
Biosample type
56
tissue
54
primary cell
26
cell line
7
in vitro differentiated cells
Organ
940
epithelium
643
kidney
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
139
AMP
4
ENCODE
Genome assembly (visualization)
114
hg19
56
GRCh38
2
hg18
organ_slims!
connective tissue
month_released!
February, 2020
BIOSAMPLE
TYPE
143 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
13
4
10
9
1
2
7
1
1
right lobe of liver
2
1
1
1
3
primary cell
hepatocyte
1
13
8
3
1
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
Download