Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
gene expression
22
candidate regulatory elements
21
accessible chromatin
17
target gene predictions
16
chromatin state
12
binding sites
12
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
43
September, 2022
29
February, 2024
22
February, 2021
10
August, 2021
10
March, 2020
4
June, 2020
4
March, 2023
4
November, 2021
3
August, 2017
May, 2021
2
February, 2020
2
January, 2020
2
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
90
bed bed3+
27
tsv
21
bigWig
13
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
142
Homo sapiens
Biosample type
57
tissue
53
primary cell
25
cell line
7
in vitro differentiated cells
Organ
915
epithelium
652
kidney
455
brain
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
138
AMP
4
ENCODE
Genome assembly (visualization)
112
hg19
57
GRCh38
2
hg18
organ_slims!
connective tissue
month_released!
May, 2021
BIOSAMPLE
TYPE
142 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
1
13
4
9
9
1
2
7
1
1
right lobe of liver
1
2
1
1
1
3
primary cell
hepatocyte
13
1
8
2
1
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
2
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
Download