Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
gene expression
22
candidate regulatory elements
accessible chromatin
20
target gene predictions
16
chromatin state
12
binding sites
12
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
43
September, 2022
21
February, 2021
20
February, 2024
10
August, 2021
10
March, 2020
4
March, 2023
3
August, 2017
3
May, 2021
2
February, 2020
2
May, 2020
1
January, 2020
1
January, 2022
1
July, 2020
1
May, 2022
1
November, 2021
1
October, 2022
Available data
72
bed bed3+
27
tsv
13
bed bed9
9
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
124
Homo sapiens
Biosample type
54
tissue
40
primary cell
23
cell line
7
in vitro differentiated cells
Organ
737
epithelium
602
kidney
424
brain
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
123
AMP
1
ENCODE
Genome assembly (visualization)
94
hg19
41
GRCh38
2
hg18
organ_slims!
connective tissue
bone marrow
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
124 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
1
13
10
9
1
2
7
1
1
right lobe of liver
1
2
1
1
1
3
primary cell
hepatocyte
13
1
3
1
1
4
2
endothelial cell of hepatic sinusoid
4
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
3
5
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
Download