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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
gene expression
22
candidate regulatory elements
21
accessible chromatin
target gene predictions
16
chromatin state
12
binding sites
12
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
30
September, 2022
29
February, 2024
22
February, 2021
10
August, 2021
7
March, 2020
4
June, 2020
4
March, 2023
3
August, 2017
3
November, 2021
2
February, 2020
2
January, 2020
2
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
73
bed bed3+
27
tsv
21
bigWig
13
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
125
Homo sapiens
Biosample type
51
primary cell
47
tissue
21
cell line
6
in vitro differentiated cells
Organ
827
epithelium
kidney
390
brain
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
122
AMP
3
ENCODE
Genome assembly (visualization)
95
hg19
56
GRCh38
2
hg18
organ_slims!
connective tissue
kidney
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
125 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
primary cell
hepatocyte
13
1
8
1
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
1
13
4
9
1
2
7
1
1
right lobe of liver
1
2
1
1
3
cell line
HepG2
2
2
2
3
5
HuH-7
1
1
1
1
1
HuH-7.5
1
1
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
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