Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
198
candidate regulatory elements
161
target gene predictions
135
accessible chromatin
127
chromatin state
76
gene expression
76
histone modifications
55
eQTL
50
binding sites
48
Fine-mapped variants
34
variant allelic effects
16
differential activity
4
caQTL
2
pQTL
Date released
318
September, 2022
229
February, 2021
53
March, 2020
50
November, 2021
42
June, 2020
39
January, 2020
31
February, 2020
31
May, 2020
29
May, 2021
27
January, 2022
25
September, 2023
19
February, 2024
17
October, 2022
13
August, 2017
11
August, 2021
7
March, 2023
7
November, 2022
5
May, 2019
4
February, 2023
3
April, 2020
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
Available data
667
bed bed3+
148
tsv
114
bed bed9
81
bigWig
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
981
Homo sapiens
Biosample type
486
tissue
330
primary cell
111
cell line
53
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
901
AMP
50
ENCODE
20
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
851
hg19
297
GRCh38
2
hg18
organ_slims!
embryo
BIOSAMPLE
TYPE
982 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
29
16
2
18
1
3
2
1
1
adipose tissue
7
8
2
6
3
4
1
1
caudate nucleus
5
3
2
4
1
1
2
3
1
coronary artery
3
3
3
3
1
2
3
2
1
subcutaneous adipose tissue
2
2
1
5
6
3
1
1
+ See 71 more…
primary cell
fibroblast
4
16
2
1
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
2
3
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
2
4
+ See 55 more…
cell line
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 21 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
hippocampal neuron
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download