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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1571
candidate regulatory elements
1235
target gene predictions
949
histone modifications
891
chromatin state
774
binding sites
701
accessible chromatin
430
gene expression
166
eQTL
99
variant allelic effects
75
differential activity
74
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
785
September, 2022
68
May, 2020
35
February, 2024
34
May, 2022
32
August, 2017
9
May, 2019
8
April, 2019
5
May, 2021
5
October, 2019
4
January, 2020
3
October, 2022
1
February, 2023
1
November, 2019
Available data
819
bed bed9
123
bed bed3+
38
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
989
Homo sapiens
Biosample type
555
tissue
192
cell line
192
primary cell
49
in vitro differentiated cells
1
stem cell
Organ
epithelium
93
kidney
89
brain
81
musculature of body
72
lung
64
connective tissue
62
intestine
61
heart
58
limb
48
vasculature
37
blood vessel
36
large intestine
36
skin of body
33
extraembryonic component
28
embryo
28
pancreas
27
bodily fluid
26
stomach
25
blood
21
liver
20
small intestine
16
mammary gland
16
placenta
16
ureter
15
adrenal gland
15
bone element
14
prostate gland
13
adipose tissue
12
artery
11
eye
11
thymus
10
penis
9
esophagus
8
gonad
8
lymph node
8
spinal cord
6
nerve
6
spleen
6
vein
5
lymphoid tissue
5
thyroid gland
4
mouth
4
ovary
4
testis
4
uterus
3
bronchus
3
skeleton
2
bone marrow
2
breast
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
989
AMP
1
T1D
Genome assembly (visualization)
977
hg19
819
GRCh38
organ_slims!
epithelium
BIOSAMPLE
TYPE
990 results
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Clear Filters
chromatin state
variant allelic effects
tissue
heart
21
2
brain
18
1
stomach
19
kidney
16
1
muscle of arm
16
1
+ See 112 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 71 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
+ See 19 more…
stem cell
H1-hESC
1
See all biosamples
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