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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1571
candidate regulatory elements
1155
target gene predictions
948
histone modifications
774
binding sites
519
accessible chromatin
85
variant allelic effects
37
chromatin state
9
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
1
pQTL
1
sQTL
Date released
2298
February, 2021
1575
September, 2022
268
May, 2021
264
June, 2020
234
February, 2024
123
May, 2020
93
October, 2022
54
January, 2020
43
March, 2020
40
August, 2021
31
August, 2017
26
November, 2022
19
February, 2023
13
May, 2022
12
November, 2019
5
January, 2022
5
September, 2023
4
October, 2019
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5117
bed bed3+
819
bed bed9
448
tsv
196
bigWig
38
bigBed bed9
34
bed bed9+
30
txt
18
csv
2
bigBed narrowPeak
1
bam
Organism
5072
Homo sapiens
Biosample type
2094
cell line
1795
tissue
893
primary cell
330
in vitro differentiated cells
4
stem cell
Organ
epithelium
309
brain
306
kidney
274
connective tissue
270
musculature of body
227
lung
209
intestine
190
bodily fluid
181
blood
176
embryo
175
limb
163
heart
155
skin of body
154
vasculature
131
large intestine
121
pancreas
118
blood vessel
109
extraembryonic component
96
liver
94
eye
84
stomach
74
uterus
67
bone element
67
mammary gland
63
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
51
ureter
49
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
mouth
11
bronchus
11
pituitary gland
10
lymphatic vessel
9
breast
8
bone marrow
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5117
AMP
206
ENCODE
40
T1D
12
LungMap
1
ITG
Genome assembly (visualization)
5112
hg19
416
GRCh38
1
hg18
organ_slims!
epithelium
BIOSAMPLE
TYPE
5117 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
variant to gene
pQTL
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 750 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
1
muscle of arm
33
16
1
1
+ See 200 more…
primary cell
monocyte
1
86
1
17
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
+ See 187 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 98 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
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