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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
27
target gene predictions
23
candidate regulatory elements
23
chromatin state
6
accessible chromatin
4
binding sites
3
eQTL
2
gene expression
Date released
69
September, 2022
February, 2021
6
June, 2020
4
May, 2021
4
October, 2022
3
January, 2022
2
March, 2024
Available data
60
bed bed3+
23
bed bed9
2
tsv
Organism
88
Homo sapiens
Biosample type
46
cell line
26
primary cell
14
tissue
2
in vitro differentiated cells
Organ
epithelium
356
brain
321
kidney
275
connective tissue
272
musculature of body
229
lung
206
pancreas
199
intestine
197
heart
186
limb
173
vasculature
160
embryo
144
bodily fluid
143
blood vessel
137
blood
126
skin of body
125
liver
122
large intestine
110
extraembryonic component
88
eye
81
stomach
71
uterus
66
adipose tissue
62
small intestine
55
artery
53
mammary gland
53
placenta
50
bone element
49
adrenal gland
49
prostate gland
46
ureter
37
thymus
36
gonad
36
penis
35
lymph node
34
spinal cord
31
esophagus
24
spleen
22
nerve
19
lymphoid tissue
18
testis
17
ovary
17
thyroid gland
16
vein
15
mouth
12
pituitary gland
10
breast
9
skeleton
9
urinary bladder
8
bronchus
8
tongue
8
vagina
7
lymphatic vessel
5
bone marrow
4
nose
1
pericardium
1
trachea
Project
88
AMP
2
ENCODE
Genome assembly (visualization)
83
hg19
26
GRCh38
organ_slims!
epithelium
month_released!
February, 2021
BIOSAMPLE
TYPE
88 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
cell line
GM23248
1
1
1
1
RPMI7951
1
1
1
1
iPS DF 19.11
2
1
1
COLO829
1
1
1
SK-MEL-5
1
1
1
+ See 10 more…
primary cell
fibroblast of dermis
4
3
3
1
foreskin fibroblast
2
1
1
1
2
skin fibroblast
2
2
2
1
fibroblast of arm
1
tissue
lower leg skin
2
2
2
skin of body
1
1
1
3
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
in vitro differentiated cells
iPS DF 4.7 Cell Line
1
skin fibroblast
1
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