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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
385
accessible chromatin
325
target gene predictions
319
candidate regulatory elements
309
gene expression
285
histone modifications
194
chromatin state
105
binding sites
63
differential activity
49
variant allelic effects
43
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
475
February, 2021
456
September, 2022
277
May, 2021
206
November, 2021
131
September, 2023
118
February, 2024
80
May, 2020
56
June, 2020
50
August, 2021
40
January, 2022
38
May, 2022
36
January, 2021
25
October, 2022
21
November, 2022
19
March, 2023
13
January, 2020
12
April, 2020
12
March, 2020
8
August, 2017
8
February, 2020
4
February, 2023
4
October, 2019
3
August, 2018
3
November, 2019
3
November, 2020
1
June, 2021
1
March, 2024
Available data
1486
bed bed3+
351
tsv
269
bigWig
159
bed bed9
30
txt
27
bed bed9+
18
csv
7
bigBed bed9
2
bigBed narrowPeak
Organism
2054
Homo sapiens
Biosample type
tissue
cell line
1650
primary cell
444
in vitro differentiated cells
4
stem cell
Organ
epithelium
332
connective tissue
310
kidney
171
vasculature
129
pancreas
114
blood vessel
109
skin of body
70
liver
53
embryo
52
musculature of body
49
mammary gland
47
penis
45
extraembryonic component
40
brain
34
lung
32
heart
29
artery
29
eye
23
intestine
20
vein
19
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
3
thyroid gland
2
adipose tissue
2
ovary
1
limb
1
pericardium
1
testis
1
thymus
Project
1716
AMP
206
ENCODE
126
KPMP
40
T1D
12
LungMap
Genome assembly (visualization)
1687
hg19
553
GRCh38
organ_slims!
epithelium
biosample_type!
tissue
cell line
BIOSAMPLE
TYPE
2100 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
histone modifications
chromatin state
binding sites
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
18
2
15
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
5
7
3
30
1
B cell
6
10
14
2
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 298 more…
in vitro differentiated cells
neural progenitor cell
10
5
5
7
15
4
hematopoietic multipotent progenitor cell
1
10
19
1
1
10
1
adipocyte
4
6
4
1
1
6
1
embryonic stem cell
6
1
1
5
1
cardiomyocytes
11
+ See 112 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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