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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1501
candidate regulatory elements
1188
target gene predictions
942
histone modifications
770
binding sites
671
accessible chromatin
76
variant allelic effects
32
chromatin state
9
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2253
February, 2021
1503
September, 2022
265
May, 2021
259
June, 2020
230
February, 2024
201
November, 2021
113
May, 2020
95
October, 2022
45
January, 2020
41
August, 2021
37
March, 2020
36
January, 2021
31
August, 2017
26
November, 2022
17
February, 2023
13
May, 2022
12
April, 2020
9
November, 2019
5
January, 2022
5
September, 2023
3
October, 2019
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5209
bed bed3+
773
bed bed9
547
tsv
351
bigWig
34
bed bed9+
30
txt
28
bigBed bed9
18
csv
2
bigBed narrowPeak
1
bam
Organism
5163
Homo sapiens
Biosample type
2086
cell line
1655
tissue
1132
primary cell
330
in vitro differentiated cells
4
stem cell
Organ
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
4955
AMP
201
ENCODE
40
T1D
12
LungMap
1
ITG
Genome assembly (visualization)
5204
hg19
598
GRCh38
1
hg18
organ_slims!
epithelium
heart
BIOSAMPLE
TYPE
5209 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 748 more…
tissue
stomach
40
21
1
3
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
1
muscle of arm
33
16
1
1
lung
33
17
+ See 191 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
CD14-positive monocyte
8
19
+ See 227 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 98 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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