Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
315
accessible chromatin
258
target gene predictions
243
gene expression
242
candidate regulatory elements
193
histone modifications
150
chromatin state
70
binding sites
63
differential activity
45
eQTL
42
variant allelic effects
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
354
September, 2022
292
February, 2021
240
May, 2021
206
November, 2021
126
September, 2023
92
February, 2024
73
May, 2020
38
June, 2020
38
May, 2022
37
January, 2022
36
January, 2021
25
October, 2022
19
August, 2021
19
March, 2023
12
April, 2020
January, 2020
9
November, 2022
8
February, 2020
3
August, 2017
3
August, 2018
3
February, 2023
3
November, 2020
2
May, 2024
2
October, 2019
1
June, 2021
1
March, 2024
Available data
1140
bed bed3+
286
tsv
249
bigWig
120
bed bed9
30
txt
27
bed bed9+
2
bigBed bed9
2
bigBed narrowPeak
Organism
1597
Homo sapiens
Biosample type
2529
tissue
2309
cell line
1642
primary cell
440
in vitro differentiated cells
4
stem cell
Organ
epithelium
302
kidney
278
connective tissue
160
vasculature
126
pancreas
110
blood vessel
100
skin of body
61
liver
49
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
34
lung
31
heart
29
artery
27
brain
23
intestine
22
embryo
22
eye
18
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1257
AMP
206
ENCODE
126
KPMP
39
T1D
12
LungMap
2
community
Genome assembly (visualization)
1302
hg19
479
GRCh38
organ_slims!
epithelium
month_released!
January, 2020
annotation_type!
representative DNase hypersensitivity sites
BIOSAMPLE
TYPE
1642 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
histone modifications
chromatin state
binding sites
differential activity
eQTL
variant allelic effects
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
15
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
5
3
7
30
1
B cell
6
10
2
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 299 more…
See all biosamples
Download