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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1567
candidate regulatory elements
1233
target gene predictions
949
histone modifications
774
binding sites
429
gene expression
333
accessible chromatin
167
eQTL
99
variant allelic effects
75
differential activity
74
Fine-mapped variants
72
chromatin state
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2381
February, 2021
1570
September, 2022
337
May, 2021
297
February, 2024
264
June, 2020
131
September, 2023
122
March, 2020
101
January, 2022
95
October, 2022
93
August, 2021
85
May, 2020
62
November, 2021
55
February, 2020
41
May, 2022
32
August, 2017
32
March, 2023
27
March, 2024
25
November, 2022
18
January, 2020
18
January, 2021
8
February, 2023
3
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
November, 2019
1
November, 2020
Available data
5370
bed bed3+
bed bed9
575
tsv
bigWig
38
bigBed bed9
34
bed bed9+
30
txt
18
csv
2
bigBed narrowPeak
1
bam
Organism
5803
Homo sapiens
Biosample type
2129
cell line
2004
tissue
1273
primary cell
395
in vitro differentiated cells
4
stem cell
Organ
epithelium
540
kidney
379
brain
364
connective tissue
288
musculature of body
232
lung
223
intestine
207
pancreas
204
vasculature
193
bodily fluid
188
heart
186
embryo
184
blood
180
limb
165
skin of body
155
blood vessel
138
large intestine
119
liver
110
extraembryonic component
91
stomach
78
uterus
76
adipose tissue
70
mammary gland
65
bone element
65
prostate gland
64
eye
63
small intestine
59
artery
55
placenta
54
lymph node
54
penis
53
adrenal gland
48
ureter
41
gonad
37
thymus
36
esophagus
35
spinal cord
27
spleen
22
testis
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
18
vein
16
lymphatic vessel
15
mouth
13
pituitary gland
12
bronchus
11
breast
10
bone marrow
8
tongue
8
urinary bladder
vagina
7
skeleton
5
trachea
3
nose
1
pericardium
Project
5583
AMP
126
KPMP
62
ENCODE
22
T1D
9
community
5
ITG
Genome assembly (visualization)
5171
hg19
561
GRCh38
4
hg18
organ_slims!
epithelium
vagina
files.file_type!
bigWig
bed bed9
BIOSAMPLE
TYPE
5807 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
eQTL
variant allelic effects
differential activity
Fine-mapped variants
chromatin state
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
8
1
A549
21
19
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 755 more…
tissue
stomach
40
21
1
1
3
1
heart
37
20
1
1
3
2
2
kidney
29
14
2
1
7
1
1
1
brain
29
16
3
1
1
1
2
1
lung
33
17
1
1
+ See 228 more…
primary cell
monocyte
2
86
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
3
1
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
+ See 275 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
7
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
1
3
4
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 111 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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