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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
132
candidate regulatory elements
90
target gene predictions
85
chromatin state
54
accessible chromatin
53
histone modifications
36
Fine-mapped variants
29
eQTL
23
gene expression
22
binding sites
15
variant allelic effects
Date released
216
September, 2022
142
February, 2021
38
March, 2020
27
January, 2020
25
June, 2020
18
February, 2020
18
January, 2022
18
May, 2020
11
May, 2021
6
August, 2017
6
October, 2022
4
May, 2019
3
September, 2023
2
January, 2021
1
February, 2024
1
March, 2024
1
May, 2022
1
November, 2019
1
November, 2021
Available data
365
bed bed3+
78
bed bed9
71
tsv
29
bigWig
6
bigBed bed9
1
bed bed9+
Organism
538
Homo sapiens
Biosample type
371
tissue
127
cell line
36
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
536
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
492
hg19
171
GRCh38
organ_slims!
epithelium
BIOSAMPLE
TYPE
539 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
gene expression
binding sites
variant allelic effects
tissue
brain
29
16
18
2
3
2
1
1
1
caudate nucleus
5
3
4
2
1
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
frontal cortex
2
2
2
2
3
2
2
1
+ See 68 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 19 more…
primary cell
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
+ See 7 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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