Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
20
candidate regulatory elements
17
target gene predictions
15
chromatin state
10
accessible chromatin
10
histone modifications
8
eQTL
6
binding sites
3
Fine-mapped variants
3
gene expression
1
caQTL
1
differential activity
variant allelic effects
Date released
40
September, 2022
20
February, 2021
7
August, 2021
6
March, 2020
4
June, 2020
3
August, 2017
2
February, 2020
2
January, 2020
2
May, 2021
2
May, 2022
1
February, 2024
1
January, 2022
1
November, 2019
1
November, 2021
1
October, 2022
1
September, 2018
Available data
66
bed bed3+
12
bed bed9
8
tsv
5
bigWig
1
bam
1
bigBed bed9
Organism
94
Homo sapiens
Biosample type
58
tissue
28
cell line
8
primary cell
Organ
epithelium
636
kidney
449
brain
444
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
93
AMP
1
ENCODE
Genome assembly (visualization)
87
hg19
26
GRCh38
2
hg18
organ_slims!
epithelium
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
94 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
binding sites
Fine-mapped variants
gene expression
caQTL
differential activity
tissue
liver
13
10
9
4
2
7
1
1
1
1
right lobe of liver
2
1
1
1
3
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
1
1
1
3
1
1
Download