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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
candidate regulatory elements
57
target gene predictions
50
chromatin state
17
accessible chromatin
15
histone modifications
12
binding sites
10
eQTL
5
gene expression
Fine-mapped variants
1
caQTL
1
differential activity
1
variant allelic effects
Date released
135
September, 2022
66
February, 2021
11
June, 2020
7
August, 2021
7
May, 2021
6
August, 2017
4
February, 2024
4
March, 2020
3
January, 2022
2
February, 2020
2
January, 2020
2
March, 2024
2
May, 2022
2
October, 2022
1
May, 2020
1
November, 2019
1
November, 2021
1
September, 2018
Available data
195
bed bed3+
44
bed bed9
7
tsv
5
bigWig
1
bam
1
bigBed bed9
Organism
257
Homo sapiens
Biosample type
189
tissue
59
cell line
9
primary cell
Organ
epithelium
652
kidney
454
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
256
AMP
1
ENCODE
Genome assembly (visualization)
245
hg19
59
GRCh38
2
hg18
organ_slims!
epithelium
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
257 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
caQTL
differential activity
variant allelic effects
tissue
large intestine
27
14
13
1
1
liver
13
10
9
4
2
1
7
1
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 9 more…
cell line
HepG2
2
3
2
2
5
3
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HuH-7
1
1
1
1
1
1
+ See 6 more…
primary cell
hepatic stellate cell
1
1
1
3
1
1
1
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