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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
43
candidate regulatory elements
29
target gene predictions
26
chromatin state
16
histone modifications
14
accessible chromatin
13
binding sites
9
eQTL
4
gene expression
Fine-mapped variants
1
caQTL
1
differential activity
1
variant allelic effects
Date released
73
September, 2022
45
February, 2021
8
June, 2020
7
August, 2021
3
August, 2017
3
March, 2020
3
May, 2021
2
February, 2020
2
January, 2020
2
January, 2022
2
May, 2022
1
February, 2024
1
March, 2024
1
May, 2020
1
November, 2019
1
November, 2021
1
October, 2022
1
September, 2018
Available data
118
bed bed3+
23
bed bed9
6
tsv
5
bigWig
1
bam
1
bigBed bed9
Organism
157
Homo sapiens
Biosample type
78
cell line
70
tissue
9
primary cell
Organ
epithelium
652
kidney
454
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
156
AMP
1
ENCODE
Genome assembly (visualization)
147
hg19
35
GRCh38
2
hg18
organ_slims!
epithelium
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
157 results
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candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
binding sites
eQTL
gene expression
caQTL
differential activity
variant allelic effects
cell line
HepG2
2
3
2
5
2
3
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 8 more…
tissue
liver
13
10
9
2
4
1
7
1
1
1
prostate gland
4
2
2
2
1
2
1
right lobe of liver
2
1
1
1
1
prostate
1
primary cell
hepatic stellate cell
1
1
1
1
3
1
1
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