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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
39
accessible chromatin
34
candidate regulatory elements
24
target gene predictions
22
chromatin state
12
histone modifications
10
binding sites
9
eQTL
5
gene expression
3
Fine-mapped variants
2
variant allelic effects
1
caQTL
1
differential activity
Date released
61
September, 2022
32
February, 2021
14
February, 2023
8
June, 2020
7
August, 2021
7
November, 2022
6
March, 2020
4
February, 2020
4
November, 2021
3
August, 2017
3
January, 2020
2
May, 2020
2
May, 2021
2
May, 2022
2
October, 2022
1
February, 2024
1
January, 2022
1
March, 2024
1
November, 2019
1
September, 2018
Available data
123
bed bed3+
24
bigWig
19
bed bed9
11
tsv
1
bam
1
bigBed bed9
Organism
162
Homo sapiens
Biosample type
108
tissue
38
cell line
16
primary cell
Organ
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
158
AMP
4
ENCODE
Genome assembly (visualization)
151
hg19
38
GRCh38
2
hg18
organ_slims!
epithelium
BIOSAMPLE
TYPE
162 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
gene expression
Fine-mapped variants
variant allelic effects
caQTL
differential activity
tissue
liver
4
13
10
9
2
1
7
1
1
1
retina
23
6
3
3
1
1
1
1
1
eye
1
4
2
2
right lobe of liver
2
1
1
1
1
3
whole blood
1
cell line
HepG2
2
2
3
2
5
3
WERI-Rb-1
1
2
1
1
1
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
+ See 2 more…
primary cell
hepatic stellate cell
3
1
1
1
1
1
1
fibroblast of the conjunctiva
2
1
1
Muller cell
2
retinal bipolar neuron
1
See all biosamples
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