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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
93
accessible chromatin
84
candidate regulatory elements
81
target gene predictions
64
gene expression
57
chromatin state
27
eQTL
26
binding sites
25
variant allelic effects
23
histone modifications
19
differential activity
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
129
September, 2022
111
February, 2021
48
November, 2021
27
September, 2023
21
February, 2024
20
March, 2020
18
January, 2020
18
May, 2020
17
June, 2020
15
May, 2021
13
February, 2020
12
August, 2021
9
January, 2022
9
October, 2022
7
August, 2017
7
March, 2023
7
November, 2022
4
February, 2023
4
October, 2019
3
April, 2020
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
346
bed bed3+
96
tsv
64
bigWig
50
bed bed9
9
txt
8
bigBed bed9
1
bigBed narrowPeak
Organism
520
Homo sapiens
Biosample type
268
primary cell
179
tissue
49
in vitro differentiated cells
23
cell line
1
stem cell
Organ
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
436
AMP
48
ENCODE
25
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
422
hg19
155
GRCh38
2
hg18
organ_slims!
epithelium
skin of body
BIOSAMPLE
TYPE
520 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
eQTL
binding sites
variant allelic effects
histone modifications
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
2
1
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
6
4
4
2
fibroblast of cardiac tissue
2
3
4
3
+ See 45 more…
tissue
adipose tissue
2
7
8
3
6
4
1
1
coronary artery
3
3
3
1
3
2
2
3
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
tibial artery
3
3
2
1
3
2
2
3
omental fat pad
2
5
2
2
2
2
3
+ See 15 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 5 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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