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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1612
candidate regulatory elements
1321
target gene predictions
972
histone modifications
911
chromatin state
904
accessible chromatin
814
binding sites
683
gene expression
168
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
283
June, 2020
219
November, 2021
104
January, 2022
65
January, 2020
57
August, 2021
56
February, 2024
54
May, 2020
44
November, 2022
29
May, 2021
28
January, 2021
26
February, 2020
25
February, 2023
19
April, 2020
14
February, 2021
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2023
Available data
904
bed bed3+
525
bigWig
25
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1026
Homo sapiens
Biosample type
522
primary cell
308
tissue
173
cell line
69
in vitro differentiated cells
Organ
215
epithelium
107
connective tissue
80
pancreas
71
brain
60
eye
54
kidney
42
vasculature
34
musculature of body
32
blood vessel
32
heart
32
liver
25
limb
24
intestine
20
adipose tissue
16
artery
16
lung
16
skin of body
15
bone element
14
blood
14
bodily fluid
12
embryo
12
large intestine
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
802
AMP
219
ENCODE
29
T1D
19
LungMap
3
ITG
Genome assembly (visualization)
959
hg19
514
GRCh38
3
hg18
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
1072 results
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Clear Filters
accessible chromatin
eQTL
primary cell
monocyte
18
4
macrophage
12
7
fibroblast
16
2
endothelial cell
15
1
excitatory neuron
12
+ See 219 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
13
kidney
10
1
liver
4
7
+ See 125 more…
cell line
EndoC_BH1
8
lymphoblastoid cell line
1
6
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 150 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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