Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1501
candidate regulatory elements
1245
target gene predictions
924
histone modifications
862
accessible chromatin
839
chromatin state
798
binding sites
664
gene expression
167
differential activity
141
eQTL
123
variant allelic effects
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
262
June, 2020
219
November, 2021
52
May, 2020
49
February, 2024
47
January, 2020
44
November, 2022
31
August, 2021
29
May, 2021
28
January, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
3
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2023
Available data
853
bed bed3+
504
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
822
Homo sapiens
Biosample type
472
primary cell
173
tissue
154
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
67
pancreas
59
eye
50
kidney
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
600
AMP
219
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
857
hg19
368
GRCh38
organ_slims!
extraembryonic component
brain
BIOSAMPLE
TYPE
867 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
sQTL
primary cell
monocyte
18
1
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 205 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
2
heart
5
+ See 78 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 139 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
See all biosamples
Download