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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1514
candidate regulatory elements
1200
target gene predictions
944
histone modifications
859
chromatin state
771
binding sites
693
accessible chromatin
430
gene expression
165
eQTL
99
variant allelic effects
75
differential activity
74
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
753
September, 2022
34
May, 2022
32
August, 2017
9
May, 2019
8
April, 2019
5
February, 2024
5
May, 2021
5
October, 2019
4
January, 2020
3
May, 2020
1
November, 2019
Available data
787
bed bed9
38
bigBed bed9
37
bed bed3+
34
bed bed9+
2
bigWig
1
bam
Organism
859
Homo sapiens
Biosample type
484
tissue
189
cell line
143
primary cell
42
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
859
AMP
Genome assembly (visualization)
859
hg19
787
GRCh38
organ_slims!
extraembryonic component
epithelium
BIOSAMPLE
TYPE
859 results
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Clear Filters
chromatin state
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 102 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 141 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 49 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 13 more…
stem cell
H1-hESC
1
See all biosamples
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