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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1562
candidate regulatory elements
1290
target gene predictions
964
histone modifications
878
chromatin state
869
accessible chromatin
793
binding sites
647
gene expression
162
eQTL
149
differential activity
125
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
776
September, 2022
34
August, 2017
34
May, 2022
8
April, 2019
8
May, 2019
5
February, 2024
5
May, 2021
3
October, 2019
2
January, 2020
2
May, 2020
1
November, 2019
Available data
804
bed bed9
39
bed bed3+
34
bed bed9+
32
bigBed bed9
1
bam
1
bigWig
Organism
878
Homo sapiens
Biosample type
472
tissue
190
cell line
172
primary cell
43
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
extraembryonic component
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
878
AMP
Genome assembly (visualization)
878
hg19
804
GRCh38
organ_slims!
extraembryonic component
vasculature
BIOSAMPLE
TYPE
878 results
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chromatin state
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 99 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 142 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 67 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 14 more…
stem cell
H1-hESC
1
See all biosamples
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