Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
211
accessible chromatin
121
target gene predictions
98
candidate regulatory elements
92
differential activity
52
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
77
November, 2021
26
February, 2024
25
June, 2020
24
February, 2021
15
November, 2022
12
January, 2020
11
August, 2021
10
February, 2023
10
January, 2021
7
April, 2020
7
May, 2021
6
September, 2022
5
October, 2019
2
May, 2022
1
May, 2020
1
November, 2019
Available data
236
bed bed3+
159
bigWig
7
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
239
Homo sapiens
Biosample type
175
primary cell
35
tissue
18
cell line
11
in vitro differentiated cells
Organ
240
epithelium
113
connective tissue
90
brain
71
pancreas
63
eye
56
kidney
44
vasculature
38
liver
37
bodily fluid
36
blood
34
musculature of body
32
blood vessel
32
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
16
artery
15
large intestine
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
9
stomach
8
adipose tissue
8
penis
8
skeleton
7
adrenal gland
7
placenta
6
gonad
5
lymphatic vessel
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
2
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
145
AMP
77
ENCODE
10
T1D
7
LungMap
Genome assembly (visualization)
238
hg19
118
GRCh38
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
239 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
histone modifications
primary cell
endothelial cell
15
1
hepatocyte
8
4
pancreatic beta cell
8
pancreatic ductal cell
6
2
pancreatic alpha cell
7
+ See 73 more…
tissue
pigmented layer of retina
20
pancreatic ductal cell
2
breast epithelium
1
corneal epithelium
1
endothelial cell
1
+ See 10 more…
cell line
EndoC_BH1
8
choroid plexus epithelial cell
1
1
epithelial cell of prostate
1
1
dermis lymphatic vessel endothelial cell
1
glomerular visceral epithelial cell
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
mammary gland epithelial cell
1
1
dermis microvascular lymphatic vessel endothelial cell
1
See all biosamples
Download