Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1649
candidate regulatory elements
1061
target gene predictions
867
histone modifications
803
binding sites
673
gene expression
466
accessible chromatin
167
differential activity
137
variant allelic effects
75
chromatin state
45
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
282
June, 2020
46
May, 2020
28
January, 2021
26
February, 2024
22
November, 2022
18
April, 2020
13
August, 2021
13
May, 2021
8
May, 2022
5
September, 2022
3
January, 2020
1
June, 2021
1
October, 2019
Available data
456
bed bed3+
126
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
421
Homo sapiens
Biosample type
198
primary cell
157
cell line
65
tissue
46
in vitro differentiated cells
Organ
97
epithelium
eye
40
connective tissue
32
pancreas
23
kidney
21
brain
14
musculature of body
12
blood
12
bodily fluid
11
vasculature
10
embryo
10
intestine
9
lung
8
blood vessel
8
lymph node
8
skin of body
7
large intestine
6
bone element
6
extraembryonic component
6
limb
6
liver
5
artery
5
heart
5
prostate gland
4
gonad
4
mammary gland
3
adipose tissue
3
penis
3
stomach
bronchus
2
esophagus
2
lymphatic vessel
2
lymphoid tissue
2
placenta
2
spinal cord
2
testis
2
uterus
1
adrenal gland
1
bone marrow
1
breast
1
mouth
1
nerve
1
nose
1
ovary
1
small intestine
1
spleen
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
ureter
1
urinary bladder
1
vein
Project
420
AMP
28
T1D
18
LungMap
Genome assembly (visualization)
843
hg19
GRCh38
organ_slims!
eye
bronchus
assembly!
GRCh38
BIOSAMPLE
TYPE
466 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
monocyte
5
regulatory T cell
5
endothelial cell
4
glutamatergic neuron
4
pancreatic alpha cell
4
+ See 122 more…
cell line
EndoC_BH1
7
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 144 more…
tissue
stomach
3
adipose tissue
2
heart
2
islet of Langerhans
2
liver
2
+ See 53 more…
in vitro differentiated cells
embryonic stem cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
B cell
2
+ See 22 more…
See all biosamples
Download