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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
104
candidate regulatory elements
95
target gene predictions
93
accessible chromatin
61
chromatin state
41
binding sites
29
histone modifications
16
variant allelic effects
11
eQTL
6
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
156
September, 2022
111
February, 2021
56
November, 2021
22
June, 2020
17
February, 2024
15
May, 2021
14
October, 2022
9
January, 2020
9
March, 2020
9
May, 2020
8
August, 2017
8
August, 2021
7
November, 2022
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
Available data
391
bed bed3+
58
bigWig
53
bed bed9
8
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
461
Homo sapiens
Biosample type
269
primary cell
74
tissue
66
cell line
51
in vitro differentiated cells
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
396
AMP
56
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
461
hg19
140
GRCh38
2
hg18
organ_slims!
eye
BIOSAMPLE
TYPE
461 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
fibroblast
4
16
1
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
osteoblast
2
2
5
1
3
2
+ See 35 more…
tissue
adipose tissue
7
8
2
6
1
1
3
omental fat pad
5
2
2
2
1
3
subcutaneous adipose tissue
2
2
1
1
4
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 5 more…
cell line
MCF-7
9
6
1
5
3
2
GM23248
2
1
1
1
1
1
T47D
3
2
2
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 9 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
mammary gland epithelial cell
1
1
1
fibroblast
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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