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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
552
gene expression
540
accessible chromatin
434
target gene predictions
401
candidate regulatory elements
303
histone modifications
238
chromatin state
152
differential activity
136
binding sites
86
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
640
February, 2021
583
September, 2022
329
November, 2021
295
May, 2021
285
September, 2023
184
February, 2024
92
May, 2020
73
August, 2021
72
June, 2020
56
January, 2021
55
March, 2023
40
January, 2022
40
May, 2022
30
October, 2022
25
January, 2020
21
November, 2022
19
April, 2020
16
February, 2020
15
March, 2020
10
August, 2017
9
August, 2018
9
October, 2019
4
February, 2023
3
November, 2020
2
November, 2019
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1916
bed bed3+
664
tsv
415
bigWig
201
bed bed9
108
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2865
Homo sapiens
Biosample type
2582
tissue
2446
primary cell
2342
cell line
464
in vitro differentiated cells
4
stem cell
Organ
845
epithelium
331
connective tissue
310
kidney
171
vasculature
129
pancreas
114
blood vessel
109
skin of body
70
liver
52
embryo
52
musculature of body
49
mammary gland
47
penis
45
extraembryonic component
39
brain
34
lung
32
heart
29
artery
eye
23
intestine
20
vein
19
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
3
thyroid gland
2
adipose tissue
2
ovary
1
limb
1
pericardium
1
testis
1
thymus
Project
2222
AMP
329
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
2161
hg19
764
GRCh38
organ_slims!
eye
BIOSAMPLE
TYPE
2910 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 442 more…
in vitro differentiated cells
neural progenitor cell
7
10
5
5
15
4
hematopoietic multipotent progenitor cell
1
1
10
19
1
10
1
adipocyte
1
4
6
4
1
6
1
embryonic stem cell
6
1
1
5
1
cardiomyocytes
11
+ See 120 more…
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