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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1400
candidate regulatory elements
1224
target gene predictions
964
histone modifications
802
binding sites
775
accessible chromatin
103
variant allelic effects
40
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2239
February, 2021
1418
September, 2022
326
November, 2021
291
February, 2024
282
May, 2021
262
June, 2020
111
May, 2020
97
October, 2022
56
January, 2021
45
March, 2020
44
January, 2020
36
August, 2021
34
August, 2017
19
April, 2020
19
November, 2022
15
May, 2022
11
November, 2019
9
October, 2019
7
February, 2023
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5341
bed bed3+
733
bed bed9
630
tsv
460
bigWig
34
bed bed9+
34
bigBed bed9
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5295
Homo sapiens
Biosample type
2079
cell line
1522
primary cell
1394
tissue
340
in vitro differentiated cells
4
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
4935
AMP
326
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5333
hg19
753
GRCh38
1
hg18
organ_slims!
eye
limb
kidney
BIOSAMPLE
TYPE
5341 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 747 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
2
15
2
2
1
+ See 304 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
brain
29
16
3
1
2
1
lung
33
17
small intestine
29
17
1
+ See 176 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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