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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1649
candidate regulatory elements
1344
target gene predictions
972
histone modifications
811
binding sites
773
accessible chromatin
122
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2383
February, 2021
1654
September, 2022
329
November, 2021
292
February, 2024
285
May, 2021
282
June, 2020
133
May, 2020
99
October, 2022
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
34
August, 2017
19
April, 2020
19
November, 2022
15
May, 2022
13
November, 2019
9
October, 2019
7
February, 2023
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5746
bed bed3+
881
tsv
851
bed bed9
439
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5700
Homo sapiens
Biosample type
2115
cell line
1732
tissue
1555
primary cell
338
in vitro differentiated cells
4
stem cell
Organ
535
epithelium
321
connective tissue
295
kidney
291
brain
276
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
169
limb
165
skin of body
164
heart
156
pancreas
153
vasculature
137
large intestine
118
blood vessel
112
extraembryonic component
99
liver
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
46
adipose tissue
44
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
13
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5337
AMP
329
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5738
hg19
726
GRCh38
1
hg18
organ_slims!
eye
skeleton
month_released!
January, 2020
BIOSAMPLE
TYPE
5746 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 757 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
3
2
kidney
29
14
2
1
8
1
1
brain
29
16
3
1
1
1
lung
33
17
+ See 201 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
2
15
2
2
1
+ See 323 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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