Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
candidate regulatory elements
36
target gene predictions
9
accessible chromatin
5
histone modifications
3
binding sites
1
eQTL
Date released
66
September, 2022
33
February, 2021
6
June, 2020
3
May, 2021
3
November, 2021
1
January, 2022
1
October, 2022
Available data
112
bed bed3+
bed bed9
3
bigWig
Organism
113
Homo sapiens
Biosample type
75
tissue
32
primary cell
4
in vitro differentiated cells
2
cell line
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
110
AMP
3
ENCODE
Genome assembly (visualization)
112
hg19
4
GRCh38
organ_slims!
eye
thymus
files.file_type!
bed bed9
BIOSAMPLE
TYPE
113 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
eQTL
tissue
placenta
26
15
1
2
1
1
chorionic villus
8
4
chorion membrane
3
3
1
umbilical cord
2
1
1
1
amnion
2
1
+ See 1 more…
primary cell
trophoblast cell
7
5
1
1
fibroblast of villous mesenchyme
2
1
1
1
2
amnion mesenchymal stem cell
1
1
amniotic stem cell
1
1
epithelial cell of amnion
1
1
+ See 5 more…
in vitro differentiated cells
trophoblast cell
2
2
cell line
HTR-8/Svneo
1
1
See all biosamples
Download