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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
302
gene expression
275
accessible chromatin
229
target gene predictions
227
candidate regulatory elements
127
chromatin state
106
differential activity
73
binding sites
56
variant allelic effects
55
histone modifications
25
eQTL
6
Fine-mapped variants
4
caQTL
2
pQTL
Date released
349
September, 2022
328
February, 2021
178
November, 2021
172
September, 2023
93
February, 2024
53
May, 2021
46
June, 2020
45
March, 2023
34
August, 2021
24
May, 2020
23
January, 2020
22
January, 2021
18
February, 2020
17
October, 2022
15
March, 2020
10
April, 2020
10
August, 2017
7
August, 2018
7
January, 2022
7
November, 2022
7
October, 2019
5
May, 2022
3
February, 2023
3
November, 2020
2
March, 2024
2
May, 2024
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
928
bed bed3+
389
tsv
216
bigWig
117
bed bed9
85
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1487
Homo sapiens
Biosample type
1102
primary cell
233
tissue
76
cell line
75
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1099
AMP
178
ENCODE
170
KPMP
22
T1D
10
LungMap
4
ITG
4
community
Genome assembly (visualization)
1064
hg19
383
GRCh38
2
hg18
organ_slims!
eye
BIOSAMPLE
TYPE
1487 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
fibroblast
16
4
1
6
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
pericyte cell
10
10
1
1
+ See 194 more…
tissue
placenta
1
15
26
14
1
2
1
adipose tissue
3
2
8
7
6
1
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
omental fat pad
2
2
2
5
2
2
3
chorionic villus
4
8
4
+ See 30 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
keratinocyte
3
1
+ See 18 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
trophoblast cell
2
2
1
hepatocyte
1
2
1
+ See 17 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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