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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
265
gene expression
257
candidate regulatory elements
211
accessible chromatin
208
target gene predictions
131
chromatin state
93
differential activity
49
binding sites
47
variant allelic effects
33
histone modifications
11
eQTL
6
Fine-mapped variants
4
caQTL
Date released
367
September, 2022
293
February, 2021
155
September, 2023
137
November, 2021
90
February, 2024
41
May, 2021
38
March, 2023
30
June, 2020
24
August, 2021
20
January, 2021
19
May, 2020
18
January, 2020
16
March, 2020
15
February, 2020
8
October, 2022
7
April, 2020
6
August, 2017
6
August, 2018
6
October, 2019
5
March, 2024
5
May, 2022
2
February, 2023
2
January, 2022
2
May, 2019
2
November, 2019
1
July, 2020
Available data
813
bed bed3+
339
tsv
176
bigWig
125
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1315
Homo sapiens
Biosample type
853
primary cell
380
tissue
60
cell line
22
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
994
AMP
155
KPMP
137
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
956
hg19
334
GRCh38
organ_slims!
eye
BIOSAMPLE
TYPE
1315 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 152 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
spleen
1
15
2
8
6
1
1
psoas muscle
7
1
8
4
+ See 37 more…
cell line
EndoC_BH1
8
8
1
3
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
keratinocyte
3
1
+ See 9 more…
in vitro differentiated cells
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 4 more…
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