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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1548
candidate regulatory elements
1276
target gene predictions
963
histone modifications
chromatin state
873
accessible chromatin
804
binding sites
117
variant allelic effects
66
Fine-mapped variants
61
eQTL
12
gene expression
6
caQTL
5
hQTL
3
meQTL
3
pQTL
3
sQTL
2
other
2
variant to gene
Date released
2327
February, 2021
1554
September, 2022
314
November, 2021
296
February, 2024
285
May, 2021
275
June, 2020
131
May, 2020
109
March, 2020
97
October, 2022
74
August, 2021
64
January, 2020
56
January, 2021
41
November, 2022
25
February, 2023
23
February, 2020
19
April, 2020
15
May, 2022
11
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5607
bed bed3+
516
bigWig
88
tsv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5697
Homo sapiens
Biosample type
2086
cell line
1746
tissue
1564
primary cell
343
in vitro differentiated cells
3
stem cell
Organ
547
epithelium
351
brain
339
connective tissue
310
kidney
293
musculature of body
238
lung
intestine
190
bodily fluid
187
limb
181
blood
178
heart
177
embryo
171
vasculature
169
pancreas
164
skin of body
134
large intestine
131
blood vessel
112
extraembryonic component
107
liver
98
eye
92
stomach
76
uterus
72
mammary gland
70
bone element
63
prostate gland
63
small intestine
59
adipose tissue
57
adrenal gland
56
placenta
54
lymph node
54
penis
artery
51
ureter
38
thymus
37
gonad
33
esophagus
33
spinal cord
26
spleen
19
testis
18
lymphoid tissue
18
nerve
17
ovary
17
thyroid gland
16
vein
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5348
AMP
314
ENCODE
58
T1D
19
LungMap
5
ITG
Genome assembly (visualization)
5744
hg19
958
GRCh38
4
hg18
organ_slims!
intestine
artery
annotation_type!
chromatin state
BIOSAMPLE
TYPE
5744 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
Fine-mapped variants
eQTL
gene expression
caQTL
hQTL
meQTL
pQTL
sQTL
other
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
MCF-7
9
6
2
1
3
+ See 751 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 204 more…
primary cell
monocyte
2
86
18
1
1
2
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
1
1
1
+ See 317 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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