Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
638
binding sites
581
histone modifications
391
target gene predictions
317
candidate regulatory elements
187
chromatin state
155
accessible chromatin
21
gene expression
10
differential activity
10
eQTL
4
variant allelic effects
Date released
1289
February, 2021
530
September, 2022
166
February, 2024
148
June, 2020
69
October, 2022
61
May, 2021
10
January, 2022
9
August, 2021
9
March, 2023
7
March, 2020
7
May, 2022
5
August, 2017
2
May, 2020
1
February, 2023
1
March, 2024
Available data
2095
bed bed3+
175
bed bed9
22
tsv
7
bed bed9+
bigWig
Organism
2314
Homo sapiens
Biosample type
2314
cell line
2300
tissue
2047
primary cell
458
in vitro differentiated cells
4
stem cell
Organ
205
bodily fluid
195
blood
127
embryo
96
lung
77
brain
70
skin of body
65
uterus
62
lymph node
53
bone element
53
prostate gland
41
epithelium
40
kidney
36
mammary gland
intestine
34
large intestine
33
pancreas
31
connective tissue
27
liver
17
musculature of body
15
penis
10
eye
10
pituitary gland
10
vasculature
8
heart
7
gonad
7
limb
7
testis
6
lymphoid tissue
5
blood vessel
4
mouth
3
adipose tissue
3
artery
3
extraembryonic component
3
placenta
3
spinal cord
2
lymphatic vessel
2
vein
Project
2305
AMP
9
community
Genome assembly (visualization)
2272
hg19
355
GRCh38
1
hg18
organ_slims!
intestine
files.file_type!
bigWig
BIOSAMPLE
TYPE
2314 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
cell line
HeLa-S3
1
55
5
3
A549
2
1
19
21
18
1
H1-hESC
2
1
39
1
1
1
8
K562
2
1
23
7
7
1
MCF-7
3
2
6
9
5
1
+ See 758 more…
See all biosamples
Download