Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
12
binding sites
10
histone modifications
9
candidate regulatory elements
7
target gene predictions
6
eQTL
3
Fine-mapped variants
3
chromatin state
3
variant allelic effects
1
caQTL
Date released
September, 2022
22
February, 2021
16
February, 2024
8
August, 2021
6
March, 2020
5
June, 2020
5
November, 2021
3
August, 2017
3
May, 2021
2
January, 2020
2
May, 2020
2
May, 2022
1
February, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
68
bed bed3+
14
bigWig
4
tsv
1
bam
1
bigBed bed9
Organism
78
Homo sapiens
Biosample type
34
primary cell
29
tissue
14
cell line
1
in vitro differentiated cells
Organ
449
epithelium
267
connective tissue
243
brain
163
musculature of body
162
kidney
142
bodily fluid
142
pancreas
137
blood
129
vasculature
124
embryo
121
heart
intestine
99
blood vessel
99
limb
99
lung
97
skin of body
80
eye
78
liver
72
large intestine
68
uterus
47
stomach
46
extraembryonic component
45
adipose tissue
45
mammary gland
43
bone element
39
artery
38
lymph node
37
prostate gland
34
penis
29
adrenal gland
26
small intestine
25
ureter
24
placenta
21
gonad
19
esophagus
17
spinal cord
16
thymus
15
vein
14
spleen
13
nerve
11
pituitary gland
11
testis
10
bone marrow
10
bronchus
10
lymphatic vessel
9
ovary
9
skeleton
9
thyroid gland
8
lymphoid tissue
5
breast
5
mouth
5
trachea
3
tongue
3
urinary bladder
2
vagina
1
nose
Project
73
AMP
5
ENCODE
Genome assembly (visualization)
78
hg19
42
GRCh38
2
hg18
organ_slims!
intestine
month_released!
September, 2022
BIOSAMPLE
TYPE
78 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
binding sites
histone modifications
candidate regulatory elements
target gene predictions
eQTL
Fine-mapped variants
chromatin state
variant allelic effects
caQTL
primary cell
hepatocyte
8
1
4
2
2
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
3
1
Liver fetal (hepatocyte)
1
tissue
liver
4
1
2
6
3
5
2
1
right lobe of liver
1
1
3
cell line
HepG2
2
2
1
1
2
1
HuH-7
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
1
Download