Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1501
candidate regulatory elements
1200
target gene predictions
958
histone modifications
880
accessible chromatin
857
chromatin state
798
binding sites
670
gene expression
167
differential activity
166
eQTL
137
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
751
September, 2022
34
May, 2022
30
August, 2017
9
May, 2019
8
April, 2019
6
January, 2020
5
February, 2024
5
May, 2021
5
October, 2019
3
May, 2020
1
November, 2019
Available data
787
bed bed9
40
bigBed bed9
35
bed bed3+
34
bed bed9+
2
bigWig
1
bam
Organism
857
Homo sapiens
Biosample type
449
tissue
193
primary cell
177
cell line
38
in vitro differentiated cells
Organ
77
kidney
74
musculature of body
72
brain
71
lung
intestine
53
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
857
AMP
Genome assembly (visualization)
857
hg19
787
GRCh38
organ_slims!
intestine
embryo
BIOSAMPLE
TYPE
857 results
search-icon
table-tab-icon
Clear Filters
chromatin state
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 95 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 82 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 129 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
mesenchymal stem cell
2
+ See 10 more…
See all biosamples
Download