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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1534
candidate regulatory elements
972
target gene predictions
858
histone modifications
800
binding sites
623
gene expression
479
accessible chromatin
134
differential activity
126
variant allelic effects
67
chromatin state
33
eQTL
6
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
2477
February, 2021
1533
September, 2022
286
September, 2023
275
June, 2020
253
May, 2021
142
February, 2024
140
May, 2020
98
October, 2022
87
August, 2021
48
March, 2020
44
November, 2022
43
May, 2022
38
February, 2020
36
January, 2021
28
August, 2017
27
March, 2024
25
February, 2023
23
March, 2023
19
April, 2020
19
January, 2020
2
August, 2018
1
August, 2020
1
August, 2022
1
January, 2018
1
January, 2022
1
July, 2020
1
November, 2019
1
November, 2020
1
October, 2019
Available data
4797
bed bed3+
717
tsv
140
bigWig
108
txt
34
bed bed9+
21
csv
7
bigBed bed9
5
bed bed9
2
bigBed narrowPeak
1
bam
Organism
5605
Homo sapiens
Biosample type
1929
cell line
1660
tissue
1655
primary cell
402
in vitro differentiated cells
4
stem cell
Organ
715
epithelium
547
kidney
336
connective tissue
314
brain
279
musculature of body
231
lung
pancreas
intestine
179
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
109
extraembryonic component
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
5303
AMP
281
KPMP
37
T1D
19
LungMap
7
community
5
ITG
Genome assembly (visualization)
6495
hg19
GRCh38
4
hg18
organ_slims!
intestine
pancreas
assembly!
GRCh38
BIOSAMPLE
TYPE
5652 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
other
pQTL
sQTL
variant to gene
representative DNase hypersensitivity sites
cell line
A549
21
19
1
2
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
1
H1-hESC
1
2
1
2
8
1
+ See 745 more…
tissue
heart
37
20
1
1
3
2
2
stomach
40
21
1
1
3
kidney
29
14
2
1
7
1
1
1
brain
29
16
3
1
1
1
1
lung
33
17
1
+ See 212 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
3
1
common myeloid progenitor, CD34-positive
27
14
monocyte
2
2
1
15
5
1
2
1
1
B cell
14
10
2
3
CD14-positive monocyte
8
19
+ See 366 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
1
4
4
neural progenitor cell
5
5
2
7
embryonic stem cell
1
1
1
6
5
cardiomyocytes
11
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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