Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
55
target gene predictions
45
binding sites
43
candidate regulatory elements
24
histone modifications
12
accessible chromatin
2
chromatin state
1
gene expression
Date released
70
February, 2021
46
September, 2022
28
February, 2024
19
October, 2022
12
June, 2020
4
May, 2021
2
August, 2017
1
March, 2024
Available data
181
bed bed3+
23
bed bed9
1
tsv
Organism
182
Homo sapiens
Biosample type
172
cell line
9
primary cell
1
tissue
Organ
871
epithelium
560
kidney
395
connective tissue
376
brain
295
musculature of body
240
lung
235
pancreas
intestine
227
vasculature
202
heart
192
limb
191
bodily fluid
188
embryo
182
blood
170
blood vessel
167
skin of body
139
large intestine
129
liver
112
extraembryonic component
100
eye
95
stomach
78
uterus
74
bone element
73
mammary gland
71
adipose tissue
64
prostate gland
64
small intestine
62
artery
58
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
39
gonad
38
thymus
35
esophagus
34
spinal cord
27
spleen
20
nerve
20
testis
19
lymphatic vessel
19
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
Project
182
AMP
Genome assembly (visualization)
181
hg19
28
GRCh38
organ_slims!
intestine
BIOSAMPLE
TYPE
182 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
binding sites
candidate regulatory elements
histone modifications
accessible chromatin
chromatin state
gene expression
cell line
K562
23
2
7
1
1
1
GM12878
8
2
2
1
1
1
GM06990
1
2
2
1
1
GM19240
2
2
1
1
1
HAP-1
2
1
2
1
1
+ See 23 more…
primary cell
peripheral blood mononuclear cell
1
4
1
peripheral blood stem cell
1
1
1
tissue
whole blood
1
See all biosamples
Download