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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1418
candidate regulatory elements
1233
target gene predictions
968
histone modifications
834
accessible chromatin
808
binding sites
105
variant allelic effects
40
chromatin state
13
caQTL
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2256
February, 2021
1436
September, 2022
330
November, 2021
286
February, 2024
282
May, 2021
268
June, 2020
113
May, 2020
99
October, 2022
56
January, 2021
46
January, 2020
45
March, 2020
41
November, 2022
35
August, 2021
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
11
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5431
bed bed3+
742
bed bed9
608
tsv
496
bigWig
34
bed bed9+
34
bigBed bed9
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5385
Homo sapiens
Biosample type
2088
cell line
1537
primary cell
1454
tissue
346
in vitro differentiated cells
4
stem cell
Organ
545
epithelium
327
connective tissue
309
brain
kidney
279
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
limb
173
heart
165
skin of body
163
vasculature
158
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
47
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5021
AMP
330
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5423
hg19
759
GRCh38
1
hg18
organ_slims!
kidney
limb
annotation_type!
eQTL
BIOSAMPLE
TYPE
5431 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 750 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
+ See 310 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
brain
29
16
3
2
1
1
lung
33
17
small intestine
29
17
1
+ See 180 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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