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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1512
candidate regulatory elements
1282
target gene predictions
971
histone modifications
867
chromatin state
863
accessible chromatin
810
binding sites
481
gene expression
165
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
724
February, 2021
274
June, 2020
219
November, 2021
89
October, 2022
55
February, 2024
51
January, 2020
51
May, 2020
44
November, 2022
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
16
August, 2021
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1664
bed bed3+
493
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1628
Homo sapiens
Biosample type
799
cell line
560
primary cell
208
tissue
106
in vitro differentiated cells
Organ
255
epithelium
119
connective tissue
70
pancreas
65
eye
58
bodily fluid
58
brain
57
blood
kidney
57
vasculature
42
blood vessel
37
liver
34
musculature of body
31
heart
31
skin of body
27
intestine
25
embryo
24
lung
23
bone element
22
limb
20
lymph node
19
mammary gland
17
artery
16
large intestine
13
prostate gland
12
extraembryonic component
10
penis
9
adipose tissue
8
gonad
8
skeleton
8
stomach
7
adrenal gland
7
placenta
7
uterus
6
lymphatic vessel
5
bronchus
5
testis
5
vein
4
bone marrow
4
esophagus
4
spinal cord
4
ureter
3
nerve
3
small intestine
3
spleen
3
thymus
3
trachea
2
lymphoid tissue
2
ovary
2
thyroid gland
1
breast
1
mouth
1
nose
1
tongue
1
urinary bladder
Project
1406
AMP
219
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1665
hg19
371
GRCh38
1
hg18
organ_slims!
kidney
BIOSAMPLE
TYPE
1673 results
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Clear Filters
accessible chromatin
binding sites
cell line
EndoC_BH1
8
1
breast cancer cell
9
fibroblast cell line
1
6
melanoma
7
HepG2
2
3
+ See 536 more…
primary cell
monocyte
18
1
endothelial cell
15
2
fibroblast
16
1
endothelial cell of hepatic sinusoid
6
6
excitatory neuron
12
+ See 228 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
2
heart
5
1
pancreas
5
1
+ See 98 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
1
retinal pigment epithelial cell
6
SGBS preadipocytes
5
adipocyte
4
1
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