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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1364
candidate regulatory elements
1194
target gene predictions
967
histone modifications
844
accessible chromatin
801
binding sites
789
chromatin state
478
gene expression
163
eQTL
121
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
266
June, 2020
211
November, 2021
51
January, 2020
51
May, 2020
49
February, 2024
44
November, 2022
28
January, 2021
26
May, 2021
25
February, 2023
16
April, 2020
15
August, 2021
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
835
bed bed3+
482
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
799
Homo sapiens
Biosample type
450
primary cell
172
tissue
154
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
588
AMP
211
ENCODE
29
T1D
16
LungMap
Genome assembly (visualization)
837
hg19
357
GRCh38
organ_slims!
kidney
esophagus
lung
BIOSAMPLE
TYPE
844 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 194 more…
tissue
retina
23
pigmented layer of retina
20
islet of Langerhans
6
heart
5
pancreas
5
+ See 80 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 139 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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