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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
188
accessible chromatin
113
target gene predictions
84
candidate regulatory elements
40
binding sites
34
variant allelic effects
27
histone modifications
12
gene expression
3
chromatin state
2
caQTL
2
differential activity
1
eQTL
Date released
125
November, 2021
101
February, 2021
85
September, 2022
60
February, 2024
20
January, 2021
18
June, 2020
17
May, 2021
15
November, 2022
11
February, 2023
8
May, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
5
October, 2022
4
August, 2021
4
January, 2020
3
August, 2017
2
March, 2023
2
May, 2022
1
February, 2020
1
November, 2019
Available data
489
bed bed3+
159
bigWig
tsv
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
2
bigBed bed9
Organism
506
Homo sapiens
Biosample type
410
primary cell
48
tissue
31
cell line
17
in vitro differentiated cells
Organ
575
epithelium
354
connective tissue
333
brain
kidney
290
musculature of body
240
lung
231
intestine
192
bodily fluid
188
pancreas
183
blood
180
heart
178
embryo
177
limb
170
vasculature
168
skin of body
139
large intestine
130
blood vessel
114
liver
113
extraembryonic component
98
eye
94
stomach
77
uterus
73
mammary gland
71
bone element
65
small intestine
64
prostate gland
59
adipose tissue
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
artery
51
ureter
40
gonad
38
thymus
36
esophagus
30
spinal cord
27
spleen
21
testis
18
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
nerve
15
skeleton
14
bronchus
14
lymphatic vessel
14
mouth
12
bone marrow
12
pituitary gland
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
352
AMP
125
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
491
hg19
165
GRCh38
organ_slims!
kidney
files.file_type!
bed bed9
tsv
BIOSAMPLE
TYPE
506 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
binding sites
variant allelic effects
histone modifications
gene expression
chromatin state
caQTL
differential activity
eQTL
primary cell
endothelial cell
15
7
2
2
1
1
2
1
hepatocyte
8
3
1
1
2
4
4
endothelial cell of umbilical vein
2
4
6
2
1
1
foreskin keratinocyte
4
11
keratinocyte
2
5
3
1
1
2
1
+ See 78 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
esophagus squamous epithelium
1
2
6
pancreatic ductal cell
2
corneal epithelium
1
+ See 7 more…
cell line
EndoC_BH1
8
1
1
2
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
1
2
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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