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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1512
candidate regulatory elements
1282
target gene predictions
970
histone modifications
854
accessible chromatin
810
binding sites
445
gene expression
113
variant allelic effects
102
differential activity
72
Fine-mapped variants
40
chromatin state
33
eQTL
13
caQTL
4
variant to gene
3
hQTL
2
meQTL
2
other
2
pQTL
1
representative DNase hypersensitivity sites
1
sQTL
Date released
2399
February, 2021
1528
September, 2022
373
May, 2021
359
February, 2024
330
November, 2021
274
June, 2020
146
September, 2023
121
March, 2020
121
May, 2020
99
October, 2022
73
August, 2021
69
January, 2020
57
March, 2023
56
January, 2021
46
February, 2020
41
November, 2022
34
August, 2017
32
February, 2023
28
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5614
bed bed3+
792
bed bed9
647
tsv
510
bigWig
38
bigBed bed9
34
bed bed9+
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
6214
Homo sapiens
Biosample type
2113
cell line
1894
primary cell
1827
tissue
421
in vitro differentiated cells
4
stem cell
Organ
871
epithelium
kidney
393
connective tissue
376
brain
295
musculature of body
240
lung
235
pancreas
231
intestine
227
vasculature
202
heart
192
limb
191
bodily fluid
188
embryo
182
blood
170
blood vessel
167
skin of body
139
large intestine
129
liver
112
extraembryonic component
100
eye
95
stomach
78
uterus
74
bone element
73
mammary gland
71
adipose tissue
64
prostate gland
64
small intestine
62
artery
58
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
39
gonad
38
thymus
35
esophagus
34
spinal cord
27
spleen
20
nerve
20
testis
19
lymphatic vessel
19
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
Project
5710
AMP
330
ENCODE
141
KPMP
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5702
hg19
879
GRCh38
1
hg18
organ_slims!
kidney
BIOSAMPLE
TYPE
6261 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
variant allelic effects
differential activity
Fine-mapped variants
chromatin state
eQTL
caQTL
variant to gene
hQTL
meQTL
other
pQTL
representative DNase hypersensitivity sites
sQTL
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
1
1
+ See 752 more…
primary cell
monocyte
2
86
18
1
15
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
8
2
1
2
B cell
14
10
6
2
+ See 366 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
brain
29
16
3
2
1
1
1
lung
33
17
1
muscle of arm
33
16
1
1
+ See 232 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 117 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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